BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038C09SP1|AL430518
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig312 1806 0.0
>3x_Contig312
Length = 1457
Score = 1806 bits (908), Expect = 0.0
Identities = 913/918 (99%)
Strand = Plus / Plus
Query: 1 agatcatgtcaactttaagaagcgtatgtkataaagttctagaagatgagaccgccgaga 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 319 agatcatgtcaactttaagaagcgtatgtgataaagttctagaagatgagaccgccgaga 378
Query: 61 tgtcaacaaggataagaagagctgaggctttgaaaagacttgggaaagttttcagaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgtcaacaaggataagaagagctgaggctttgaaaagacttgggaaagttttcagaaggg 438
Query: 121 cataccggacgaaaacagaacaagaggatgcccaagtgtttgaagagctcgtggcggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cataccggacgaaaacagaacaagaggatgcccaagtgtttgaagagctcgtggcggaag 498
Query: 181 caagcwagawaaagggtcataagcatcacactagcagcactgccaatwaacagtgaatac 240
||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 499 caagcaagaaaaagggtcataagcatcacactagcagcactgccaataaacagtgaatac 558
Query: 241 aaaatattctcaaaccgagtgcttcctacctaataatagcataaacacttgccaattctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aaaatattctcaaaccgagtgcttcctacctaataatagcataaacacttgccaattctt 618
Query: 301 gttttttcattctttatttctgcatcatgttcatatatacatacatagcttgctacttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gttttttcattctttatttctgcatcatgttcatatatacatacatagcttgctacttaa 678
Query: 361 ttgacaataatattaatttaacatagcgataaactttcgactacgcaaccgaatattgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttgacaataatattaatttaacatagcgataaactttcgactacgcaaccgaatattgca 738
Query: 421 actcctgacgatcaacgggggagggctgtaaattacaaatattgtttaagaattgctcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 actcctgacgatcaacgggggagggctgtaaattacaaatattgtttaagaattgctcta 798
Query: 481 cgttctgattgagactgagcagcaggttttccctcctttatgtcttgagaaacaaggtca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 cgttctgattgagactgagcagcaggttttccctcctttatgtcttgagaaacaaggtca 858
Query: 541 tcggcttcgatagacttttctatatatgtgatcaacttatctaagtcgacggcggcagtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 tcggcttcgatagacttttctatatatgtgatcaacttatctaagtcgacggcggcagtt 918
Query: 601 ggaatacgaaccattccatgatcatcacataccaaataatcgccgggattaattgtctcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 ggaatacgaaccattccatgatcatcacataccaaataatcgccgggattaattgtctcc 978
Query: 661 gtagtgccatcgctaatcttaatcttcaactcacagttatacgaaatcggtttcaaaact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 gtagtgccatcgctaatcttaatcttcaactcacagttatacgaaatcggtttcaaaact 1038
Query: 721 gcttttggagcacaggtaccgataccgtaactgaaaacgctgtgatccaatgccttatgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 gcttttggagcacaggtaccgataccgtaactgaaaacgctgtgatccaatgccttatgc 1098
Query: 781 tcttcgatatctctgattctaccaaatacaaccgtaccatggctgcmtaaatattttgct 840
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1099 tcttcgatatctctgattctaccaaatacaaccgtaccatggctgcctaaatattttgct 1158
Query: 841 cttgtagacattaatccaccgtacatgccctgaataggtttggtatatggagcactgctc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 cttgtagacattaatccaccgtacatgccctgaataggtttggtatatggagcactgctc 1218
Query: 901 aattgtaaatcttcagtc 918
||||||||||||||||||
Sbjct: 1219 aattgtaaatcttcagtc 1236
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6302
Number of Sequences: 1807
Number of extensions: 6302
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)